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Exploration-Exploitation Paradigm for Networked Biological Systems

Vito Dichio and Fabrizio De Vico Fallani
Phys. Rev. Lett. 132, 098402 – Published 1 March 2024

Abstract

The stochastic exploration of the configuration space and the exploitation of functional states underlie many biological processes. The evolutionary dynamics stands out as a remarkable example. Here, we introduce a novel formalism that mimics evolution and encodes a general exploration-exploitation dynamics for biological networks. We apply it to the brain wiring problem, focusing on the maturation of that of the nematode Caenorhabditis elegans. We demonstrate that a parsimonious maxent description of the adult brain combined with our framework is able to track down the entire developmental trajectory.

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  • Received 30 June 2023
  • Accepted 24 January 2024

DOI:https://doi.org/10.1103/PhysRevLett.132.098402

© 2024 American Physical Society

Physics Subject Headings (PhySH)

NetworksPhysics of Living SystemsInterdisciplinary PhysicsStatistical Physics & Thermodynamics

Authors & Affiliations

Vito Dichio and Fabrizio De Vico Fallani

  • Sorbonne Universite, Paris Brain Institute-ICM, CNRS, Inria, Inserm, AP-HP, Hopital de la Pitie Salpêtriere, F-75013, Paris, France

  • *Corresponding author: fabrizio.de-vico-fallani@inria.fr

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Issue

Vol. 132, Iss. 9 — 1 March 2024

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